BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008A12LP1|AL425800
(858 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig101 1082 0.0
>3x_Contig101
Length = 1470
Score = 1082 bits (546), Expect = 0.0
Identities = 554/557 (99%)
Strand = Plus / Plus
Query: 1 aaaaacagtcaaatggctttagcattctattgaagggtttaatgaacttttgaaagtgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 914 aaaaacagtcaaatggctttagcattctattgaagggtttaatgaacttttgaaagtgca 973
Query: 61 gcctctaaaagataaaagaattgcaccgcaaggtcctttacggagctgtgtggtcatcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 974 gcctctaaaagataaaagaattgcaccgcaaggtcctttacggagctgtgtggtcatcca 1033
Query: 121 ttattatgtcaaaccaagaagccaccggaagttggcagtgtttacacataaataatgata 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1034 ttattatgtcaaaccaagaagccaccggaagttggcagtttttacacataaataatgata 1093
Query: 181 tttcgttggctaaaattacgaaagagtcatcgtcatccatcatcggtgtactgaagctct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1094 tttcgttggctaaaattacgaaagagtcatcgtcatccatcatcggtgtactgaagctct 1153
Query: 241 gcgaggatgagaagttcttacggtttcgtgtaagcgcagagcagattccaaaggaattgg 300
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1154 gcgaggatgagaagttcttacggtttcgtgtaagctcagagcagattccaaaggaattgg 1213
Query: 301 gctgttcgaatggagtagattcaattagcgaactttataatatattgacgaaaggagtgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1214 gctgttcgaatggagtagattcaattagcgaactttataatatattgacgaaaggagtgg 1273
Query: 361 agggtagctcaattgtagccatggataaaaagatcataatatccatccagagaaagaagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1274 agggtagctcaattgtagccatggataaaaagatcataatatccatccagagaaagaagg 1333
Query: 421 cttcttcagtggaaattgaaacggcaattatcgcgattaccggcgaacacttaacgcaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1334 cttcttcagtggaaattgaaacggcaattatcgcgattaccggcgaacacttaacgcaat 1393
Query: 481 tactattggaatgtaatacgtatcttatgaggaacgtgttggttttaaattacgttcaaa 540
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1394 tactattggaatgtaatacgtatcttatgaggaacgtgttggttntaaattacgttcaaa 1453
Query: 541 actatacttctcacact 557
|||||||||||||||||
Sbjct: 1454 actatacttctcacact 1470
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7057
Number of Sequences: 1807
Number of extensions: 7057
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 858
length of database: 10,358,551
effective HSP length: 16
effective length of query: 842
effective length of database: 10,329,639
effective search space: 8697556038
effective search space used: 8697556038
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)